One of the lab’s hallmark contributions is the discovery and in-depth study of the Piwi-piRNA pathway, a small RNA-based gene regulatory system that plays a key role in maintaining genome integrity. Piwi proteins, in complex with piRNAs (Piwi-interacting RNAs), silence transposable elements—segments of DNA that can move within the genome and cause mutations. This silencing is especially crucial in germline and stem cells, where genome stability is paramount. The lab investigates how Piwi proteins recognize their targets, how piRNAs are generated, and how this pathway epigenetically controls gene expression. This research has broad implications for fertility, developmental biology, and cancer.
The lab explores the molecular mechanisms by which stem cells maintain their ability to self-renew while also generating differentiated progeny. Using model systems such as Drosophila, mice, and human cells, the lab identifies key intrinsic factors (e.g., transcriptional regulators, epigenetic modifiers) and extrinsic niche signals that guide these processes. A particular focus is placed on understanding asymmetric cell division, which allows one daughter cell to remain a stem cell while the other differentiates. Insights from this work inform how tissues regenerate and how imbalances in these processes may lead to diseases like cancer or degenerative disorders.
The lab also investigates how gene expression is regulated beyond the DNA sequence, with a focus on epigenetic mechanisms and RNA regulation in stem and germline cells. This includes studying histone modifications, chromatin remodeling, and the role of non-coding RNAs such as piRNAs in shaping the transcriptome. The team uses high-throughput sequencing and genome-wide analyses to map these regulatory landscapes and uncover how they contribute to cell fate decisions, genome defense, and cellular longevity.